Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs71328551 chr21:38457291 T/TCAAACAAA 0 252 33.48 22.93 1.07 KM Plot
SARC rs71384366 chr16:78182411 A/AT 4.11E-6 248 36.27 30.33 13.27 KM Plot
SARC rs71396154 chr16:78177271 G/C 7.42E-6 248 36.27 28.6 15.2 KM Plot
SARC rs71617204 chr3:53042951 G/A 1.67E-14 257 30.93 35.37 1.17 KM Plot
SARC rs7161935 chr15:81307563 G/A 1.24E-5 256 31.57 35.67 7.82 KM Plot
SARC rs7166105 chr15:75343942 A/G 6.44E-5 258 16.05 28.78 33.18 KM Plot
SARC rs7185298 chr16:46567166 A/T 0 258 1.07 28.33 32.5 KM Plot
SARC rs7211025 chr17:35026679 C/A 2.07E-8 250 30.93 35.27 9.47 KM Plot
SARC rs7216112 chr17:45406345 C/T 5.8E-5 258 33.77 29.9 22.63 KM Plot
SARC rs72609869 chr8:129457834 T/C 2.91E-13 254 33.95 26.53 3.97 KM Plot
SARC rs72667757 chr4:87946994 C/A 7.25E-5 258 30.93 36.4 19.88 KM Plot
SARC rs72667759 chr4:87952199 C/G 1.54E-5 256 30.75 36.4 19.8 KM Plot
SARC rs72872318 chr4:80236313 T/A 1.31E-13 255 33.48 27.37 3.58 KM Plot
SARC rs73031548 chr3:15536634 G/A 7.72E-5 257 33.2 30.73 10.6 KM Plot
SARC rs73033070 chr3:15570934 T/C 9.3E-5 255 32.4 33.17 10.6 KM Plot